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Glycosyl Ureas as
Interesting Scaffold in Medicinal Chemistry |
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Paper Id :
17867 Submission Date :
2023-06-20 Acceptance Date :
2023-06-28 Publication Date :
2023-07-25
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Abstract |
Synthetic urea's are known constituent of several natural
products and pharmaceutical preparation. Urea derivatives are widely used in
medicinal chemistry because this moiety is involved in bio chemical process in
drug development. This structural component is very good building blocks in
solid phase synthesis and act as precursor for synthesis of pharmacological active
molecules. In present work a glycosyl urea derivative was synthesized and
screened for its biological activity. |
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Keywords | Glycosyl Urea, Isocyanate, Dichloromethane, M. Tuberculosis. | ||||||
Introduction | Tuberculosis is an infectious disease caused by Mycobacterium
tuberculosis and it is estimated that about 10.6 million people were affected
worldwide annually and it is one of the deadliest and killer disease throughout
the world. [1] WHO reports estimate about one third of world population
suffering with its latent infection and therefore it has been declared as
global emergency [2,3]. Therefore present study is focused on the compounds
derived from carbohydrates as possible inhibitor of tuberculosis. |
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Objective of study | Glycosyl ureas are known to have antibacterial and
antidiabetic activity. These compounds are pharmacologically important because
of their biological activity. Therefore present study involves synthesis of N1,
N3 substituted Glycosyl ureas for investigation of its biological activity. |
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Review of Literature | After covid-19 pandemic new cases of tuberculosis have
been increased globally. Multiple drug resistant (MDR) tuberculosis and its
combination with HIV and mycotic infections particularly due to Candida sp.
like Candida albicans, and Cryptococcus neoformans in patients with weak immune
system have worsened the problem. [4-7]. Among various targets mycobacterium
cell wall was chosen as unique target for development of new class of
antituberculosis agents. Since the mycobacterium cell wall is composed of
various glycosyl polymers like mAGP complex (mycolylated arabinogalactan
peptidoglycan) complex, therefore the enzymes involved in biosynthesis of cell
wall polymers are very selective target to derive new chemotherapeutic
agents. In general the derivatives of glycosyl urea
particularly with respect to their roles as artificial receptors are
important in this respect. [8] Many glycohybrid molecules having
condensed structure of urea are known for inhibitory activity against enzymes
like glycosidase, glycogen phosphorylases etc. [9, 10] Glycosidase and glycosyl
transferases are two important enzymes involved in biosynthesis of
mycobacterium cell wall. Some glycosyl ureides have shown
antileishmanial and antimycobacterial activity. [11, 12]
Limitations of the existing drugs, prolong treatment as well as emergence
of resistance has led to the scientific community to discover new
chemical entities (NCE) as antitubercular agents with novel mode of action. |
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Methodology | -D-xylofuran-1,5-dialdose. [15, 16] This glycosyl aldehyde on
Wittig reaction with carbethoxy methylene triphenyl phosphorane or triethyl
phosphonoacetate resulted into respective glycosyl olefinic ester as a mixture
of E and Z isomer . The glycosyl olefinic ester on conjugate addition reaction
with 1, 5 dimethylhexyl amine led to the formation of corresponding glycosyl
amino ester as a mixture of diasteroisomers. [17] The major isomer was
separated by column chromatography and this was used as starting material for
the formation of glycosyl urea compound. Hence the synthetic strategy involves
the reaction of glycosyl amino ester with benzyl isocyanate in anhydrous
dichloromethane (DCM) resulted in the formation of N1, N3-substituted glycosyl
urea compound as shown below in (Scheme). The compound was characterized with
help of elemental analysis, IR, 1H NMR, 13C NMR and MS FAB spectroscopy
techniques. Further the synthesized compound was investigated for its
biological activity against M. tuberculosis. Such compounds attracts the
attention of scientific community to develop pharmacologically active compounds
such as antibacterial, antifungal, and anti-inflammatory compounds. [18]a-D-glucofuranose which
on oxidation with sodium metaperiodate yielded 3-O-methyl-1,2-O-isopropylidene-
a-D-glucofuranose in
good yield as shown in scheme. [13, 14] The later on methylation with methyl
iodide and selective deprotection gave 3-O-methyl-1,2- O-isopropylidene- aThe glycosyl ureas
have been synthesized as possible inhibitors of mycobacterium cell wall
polymers. Sugar based complex molecules like glycosidase, glycosyl transferase
and enzymes responsible for mycolic acid biosynthesis have been taken into
consideration. Glycohybrid compounds are a new class of molecules of great
medicinal value and are very important in design and development of novel class
of antimycobacterial agents. The synthesized compound was screened for its biological
activity against Mycobacterium tuberculosis. The synthesis of glycosyl urea
compound starts with easily available D-glucose which on protection with
acetone in presence of sulphuric acid followed by methylation gives
1,2,5,6,-di-O-isopropyledene- |
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Analysis | Experimental: Ethyl-[(1R, 2R,
3S, 4S, 5S)-5-{N3-benzyl-N1-(1, 5-dimethylhexyl)-5,
6-dideoxy-1, 2-O- isopropylidene-3-O-methyl-1-ureidyl}-1,
4-heptofuranos-5-yl]-uronoate : This glycosyl
urea compound was obtained by the reaction of glycosyl amino ester
(1.5 g, 3.74 mmol) on benzyl isocyanate (0.46 mL, 3.74 mmol) in solvent dry
dichloromethane for 6-8 hours . After completion of reaction the crude
product obtained was dried and weighed. The desired compound was purified by
column chromatography over SiO2 using the solvent gradient of
hexane:ethyl acetate (4:1) as eluent which afforded the glycosyl urea compound
as colorless foam. Yield (1.38g, 91%), [ɑ]D25 -25 (c
0.15, CH3OH); MS FAB m/z = 535 [M+H]+; IR (neat): vmax cm-1 3371
(NH), 2930 (CH), 1730 (C=O), 1639 (NC=O); 1H NMR (CDCl3,
200 MHz) δ =7.29 (m, 5H, Ar-H), 5.83 (d, J = 3.7 Hz, 1H, H-1),
4.51 (d, J = 3.7 Hz, 1H, H-2), 4.39 (d, J =
5.38 Hz, NCH₂Ph), 4.10 (m,
3H, H-4 and OCH2CH3), 3.19 (d, J = 3.0
Hz, 1H, H-3), 3.17 (s, 3H, OCH3), 3.10 (m, 1H, H-5), 2.80 (m, 1H,
H-6A), 2.67 (m, 1H H-6B), 1.55 (d, 3H, NCH(CH3)),
1.47 and 1.34 [each s, each 3H, C(CH3)2], 1.30 (m, 10H,
OCH2CH3 and CH₂ s and CH(CH3)2).
0.86 (d, J = 6.5 Hz, 6H, CH(CH3)2); 13C
NMR (CDCl3, 50 MHz): δ=172.4 (OC=O); 158.5 (NC=O); 140.4 (Ar-C);
128.7, 128.0, 127.9, 127.2, 127.1 (Ar-CH); 112.2 [>C(CH3)2]:
105.1 (C-1); 84.5 (C-2): 81.2 (C-4): 81.0 (C-3); 61.1 (OCH2CH3):
57.7 (OCH3): 57.5 (C-5), 45.1 (NCH2Ph), 35.9 (C-6); 36.6,
30.7 (-CH₂’s), 28.3
(NCH); 27.1, 26.5 [>C(CH3)2]: 25.7 (- CH2CH(CH3)2);
23.0 (CH(CH3)2); 20.2, 19.4 (CH(CH3)2);
14.5 (OCH2CH3); Elemental Analysis for C29H46N2O7:
C, 65.16; H, 8.61; N, 5.24; Found: C, 65.44; H, 9.01; N, 5.63%. Bioevaluation:
The synthesized
glycosyl urea compound [ Ethyl-[(1R, 2R, 3S, 4S, 5S)-5-{N3-benzyl-N1-(1,
5-dimethylhexyl)-5, 6-dideoxy-1, 2-O- isopropylidene-3-O-methyl-1-ureidyl}-1,
4-heptofuranos-5-yl]-uronoate] has been taken as test compound and our
earlier reported glycosyl urea compound is taken as reference sample. Both were
evaluated for antitubercular activities against M. tuberculosis H37Ra
and H37Rv. The results are depicted as shown below in Table. The
bioevaluation methods used for screening of the above compound against M.
tuberculosis are Micro Alamar Blue Assay and Agar Micro dilution techniques.[19,
20] Table: Inhibitory
activity of N1, N3-substituted Glycosyl Ureas
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Result and Discussion |
The glcosyl urea compound with 1,5 dimethyl hexyl substituent
at N1 position was synthesized to see the
structure activity relationship. The table shows comparative study of
antitubercular activity of glycosyl ureas. The earlier prepared compound
with twelve carbon chain showed activity against the virulent strain H37Rv at
MIC 12.5 µg /ml and showed inhibition against the strain H37Ra of
M. tuberculosis at MIC >25 µg /ml while the glycosyl urea compound
having 1,5 dimethyl hexyl chain at N-1 position and benzyl substituent at N3 position showed inhibition at MIC >25 µg
/ml against both the strains H37Ra and H37Rv of M. tuberculosis. Although, this test compound has shown
activity to some extent and this led us to further optimize the compound for
better biological activity. |
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Conclusion |
In conclusion it can be stated that glycosyl ureas might be
useful compounds to search lead molecules against M. tuberculosis. As per
earlier reported work such compounds have shown -glucosidase inhibitory
activity and their transformation in C- nucleosides shows their potential in
the field of pharmaceuticals and medicinal chemistry. Author thanks to
medicinal and process chemistry division of CDRI for all experimental work and
biological activity. |
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